Scientists in the U.K. have developed a novel approach to enabling collaborations between researchers at conferences and academic meetings: Treat them like genes. Using mathematical algorithms, the team created a method of matching conference-goers according to pre-set criteria, bringing about unforeseen collaboration opportunities while also enabling “would-like-to-meet” match-ups across disciplines and knowledge areas.
From the sun, a solution: Cornell Univ. and Weill Cornell Medical College researchers have remodeled an energy-intensive medical test, designed to detect a deadly skin cancer related to HIV infections, to create a quick diagnostic assay perfect for remote regions of the world. By harnessing the sun’s power and employing a smartphone application, medical technicians may now handily administer reliable assays for Kaposi’s sarcoma.
An ancient chemical, present for billions of years, appears to have helped proteins function properly since time immemorial. Proteins are the body's workhorses, and like horses they often work in teams. There exists a modern day team of multiple chaperone proteins that help other proteins fold into the complex 3-D shapes they must achieve to function. This is necessary to avert many serious diseases caused when proteins misbehave.
In the battle against infection, immune cells are the body's offense and defense. It has long been known that a population of blood stem cells that resides in the bone marrow generates all of these immune cells. But most scientists have believed that blood stem cells participate in battles against infection in a delayed way, replenishing immune cells on the front line only after they become depleted.
Yeast can quickly adapt to changes in its environment with the help of molecules known as long non-coding RNAs, a Purdue Univ. study shows. The team of researchers found that long non-coding RNAs prepare metabolic genes to be activated swiftly when baker's yeast needs to switch its source of energy from glucose to an alternative sugar, galactose.
The time and cost of sequencing an entire human genome has plummeted, but analyzing three billion base pairs from a single genome can take many months. However, a Univ. of Chicago-based team working with Beagle, one of the world's fastest supercomputers devoted to life sciences, reports that genome analysis can be radically accelerated. The Argonne National Laboratory computer is able to analyze 240 full genomes in about two days.
Researchers at the San Diego Supercomputer Center have developed software that greatly expands the types of multi-scale QM/MM (mixed quantum and molecular mechanical) simulations of complex chemical systems that scientists can use to design new drugs, better chemicals or improved enzymes for biofuels production.
Univ. of Georgia (UGA) marine scientists are uncovering the mechanisms that regulate the natural production of an anti-greenhouse gas. A new $2 million National Science Foundation grant will allow the UGA-led research group to further document how genes in ocean microbes transform sulfur into clouds in the Earth's atmosphere.
Screening more than 100 spider toxins, Yale Univ. researchers identified a protein from the venom of the Peruvian green velvet tarantula that blunts activity in pain-transmitting neurons. The findings, reported in Current Biology, show the new screening method used by the scientists has the potential to search millions of different spider toxins for safe pain-killing drugs and therapies.
Tularemia is endemic in the northeastern U.S., and is considered to be a risk to biosecurity, much like anthrax or smallpox, because it has already been weaponized in various regions of the world. A postdoctoral researcher at Lawrence Livermore National Laboratory has recently described his work to uncover the secrets of the bacterium Francisella tularensis, which causes tularemia, also known as "rabbit fever."
Many vaccines consist of a killed or disabled version of a virus. However, for certain diseases, this type of vaccine is ineffective, or just too risky. An alternative, safer approach is a vaccine made of small fragments of proteins produced by a disease-causing virus or bacterium. This has worked for some diseases, but in many cases these vaccines don’t provoke a strong enough response. Until now.
Buzzwords, like a virus, spread inexorably from discipline to discipline. Take “big data,” which originated in supercomputing and now has infected finance, logistics, intelligence and defense and life science. Is there some rule requiring every presentation on genomics to include a slide comparing sequencing costs to Moore’s Law, followed by slides lamenting how much data we are producing and the resources required to act on it?
Researchers who use x-rays to take snapshots of proteins need a billion copies of the same protein stacked and packed into a neat crystal. Now, scientists using exceptionally bright and fast x-rays supplied by free-electron lasers can take a picture that rivals conventional methods with a sheet of proteins just one protein molecule thick. This broadens the number and type of proteins that can be studied.
Researchers have formed the first high-definition picture of the Cas9 complex, a key part of the CRISPR-Cas system used by scientists as a genome-editing tool to silence genes and probe the biology of cells. Their findingsare expected to help researchers refine and further engineer the tool to accelerate genomic research and bring the technology closer to use in the treatment of human genetic disease.
An international team of researchers has demonstrated a new method for studying the structure of proteins that could lead to important advances in biology and other fields. For the first time, protein crystals have been studied in 2-D at room temperature with x-rays, using a new technique that could open the door for scientists to learn more about an important class of proteins that constitute about one-third of all human proteins.
For four decades, polychlorinated biphenyls (PCBs) and heavy metals from nearby manufacturing plants flowed into New Bedford Harbor, creating one of the EPA’s largest Superfund cleanup sites. It’s also the site of an evolutionary puzzle: small Atlantic killifish are not only tolerating the toxic conditions in the harbor, they seem to be thriving there. In a new paper, researchers may have an explanation for their genetic resistance to PCBs.
Researchers at NIST have developed a new method for accurately measuring a key process governing a wide variety of cellular functions that may become the basis for a health checkup for living cells. The NIST technique measures changes in a living cell's internal redox (reduction-oxidation) potential, a chemistry concept that expresses the favorability of reactions in which molecules or atoms either gain or lose electrons.
Univ. of California, Berkeley researchers have shown that chronic stress generates long-term changes in the brain that may explain why people suffering chronic stress are prone to mental problems such as anxiety and mood disorders later in life. Their findings could lead to new therapies to reduce the risk of developing mental illness after stressful events.
Researchers have introduced a unique microrobotic technique to assemble the components of complex materials, the foundation of tissue engineering and 3-D printing. Tissue engineering and 3-D printing have become vitally important to the future of medicine for many reasons. The shortage of available organs for transplantation, for example, leaves many patients on waiting lists for life-saving treatment.
Computational biologists in Austria have recently shown that the common practice of averaging is not always a good thing when it comes to analyzing protein crystal structures. A study shows that protein structures could be more dynamic and heterogeneous than current methods of x-ray analysis suggest.
Plant growth is orchestrated by a spectrum of signals from hormones within a plant. A major group of plant hormones called cytokinins originate in the roots of plants, and their journey to growth areas on the stem and in leaves stimulates plant development. Though these phytohormones have been identified in the past, the molecular mechanism responsible for their transportation within plants was previously poorly understood. Until now.
Inspired by tiny particles that carry cholesterol through the body, Massachusetts Institute of Technology chemical engineers have designed nanoparticles that can deliver snippets of genetic material that turn off disease-causing genes. This approach, known as RNA interference, holds great promise for treating cancer and other diseases. However, delivering enough RNA to treat the diseased tissue has proven difficult.
On the eve of the 25th World AIDS Day (December 2014), President Barack Obama expressed hope to our nation, proclaiming that an “AIDS-free generation is within our reach.” During his speech, Obama expressed how our nation has made significant strides toward strengthening scientific investments, building effective HIV/AIDS education and prevention programs and bringing together public and private stakeholders.
In 2011, biologists at Caltech demonstrated a highly effective method for delivering HIV-fighting antibodies to mice—a treatment that protected the mice from infection by a laboratory strain of HIV delivered intravenously. Now the researchers have shown that the same procedure is just as effective against a strain of HIV found in the real world, even when transmitted across mucosal surfaces.
The lipid-rich membranes of cells are largely impermeable to proteins, but evolution has provided a way through—in the form of transmembrane tunnels. A new study in Germany shows in unmatched detail what happens as proteins pass through such a pore.