Deploying sophisticated high-throughput sequencing technology, a team of Whitehead Institute and Broad Institute researchers have collaborated on a comprehensive, high-resolution mapping that confirms a post-transcriptional RNA modification called pseudouridylation does indeed occur naturally in messenger RNA. This is somewhat surprising finding using a new quantitative sequencing method.
Building on previous animal and human research, a new study has identified an electrophysiological marker for threat in the brain. The findings illustrate how fear arises in the brain when individuals are exposed to threatening images, and the study is the first to separate emotion from threat by controlling for the dimension of arousal, the emotional reaction provoked, whether positive or negative, in response to stimuli.
Despite being outlawed in 2012 in the U.S., the synthetic drugs known as “bath salts”—which really aren’t meant for your daily bath—are still readily available in some retail shops, on the Internet and on the streets. To help law enforcement, scientists are developing a novel method that could be the basis for the first portable, on-site testing device for identifying the drugs.
European laboratories testing food for dioxins now have lower-cost, smaller-footprint alternatives for confirming levels of toxic contaminants, thanks to a new European Union regulation. Thermo Fisher Scientific worked closely with national reference labs in the EU to support the development of the new regulation, which permits use of gas chromatograph-triple stage quadrupole mass spectrometers (GC-MS/MS) for confirmation.
Cancerous brain tumors are notorious for growing back despite surgical attempts to remove them, and for leading to a dire prognosis for patients. But scientists are developing a new way to try to root out malignant cells during surgery so fewer or none get left behind to form new tumors. The technology relies on a Raman scanner that can read injected nanoprobes.
A team of researchers in the U.S. and China have developed a new sensor that can detect and count nanoparticles, at sizes as small as 10 nm, one at a time. The researchers say the sensor, which is a Raman microlaser sensor in a silicon dioxide chip that does not need rare-earth ions to achieve high resolution, could potentially detect much smaller particles, viruses and small molecules.
Scientists in Germany have managed to take a unique look at the membranes of human cells using a new technique called dSTORM: direct stochastic optical reconstruction microscopy. This is a specific form of high-resolution fluorescence microscopy, and it makes individual saccharified proteins and lipids visible at the molecular level.
In the past, immune cells were clearly divided into innate cells, which respond to attacks in a non-specific way, and adaptive cells, which learn to recognize new antigens and gain the ability to rapidly react to later attacks. Researchers at RIKEN in Japan have discovered that is not always the case, having found that killer T cells previously thought to be innate, and thus short-lived, can remain in the lung for up to nine months.
Earth’s magnetic field, a familiar directional indicator over long distances, is routinely probed in applications ranging from geology to archaeology. Now it has provided the basis for a technique which might, one day, be used to characterize the chemical composition of fluid mixtures in their native environments.
Melanoma is the fifth most common cancer type in the United States. A new handheld device may help diagnosis and treatment efforts for the disease. It uses lasers and sound waves and is the first that can be used directly on a patient to accurately measure how deep a melanoma tumor extends into the skin.
Life science researchers are benefiting from easy-to-use, ultra-fast, automated and integrated platforms that address specific application needs. These platforms combine hardware, software and reagents into integrated, push-button analysis systems capable of transforming workflows which once took several days into minutes.
Sample preparation is a critical step in the analytical process. Studies report that sample prep can represent about 60% of a laboratory technician’s time and also forms one of the principal sources of error. Many techniques to conduct sample prep are available to researchers, such as filtration, digestion, dialysis, liquid/liquid extraction and solid phase extraction.
China's first emperor ordered the building of a glorious underground palace complex, mirroring his imperial capital, that would last for an eternity. Protecting this underworld palace was his imperial guard, cast in terracotta. Efforts to preserve the 1974 archaeological find have been hampered by failures to pinpoint the binding material used in applying pigments to the soldiers. Mass spectrometry studies have recently solved this mystery.
In the same week that the U.S. surgeon general issued a lengthy report about the dangers of skin cancer, researchers at Montana State Univ. published a paper breaking new ground on how DNA responds when exposed to ultraviolet (UV) light. The study, made possible by femtosecond lasers used for ultrafast spectroscopy, showed how DNA transfers electrons when excited by UV light.
The human body contains a unique protein that has the unusual property of destroying itself after a few hours of existence. Called PAI-1, it affects many physiological functions, including the dissolving of coagulated blood. Recent research in Denmark has shed light on how PAI-1 changes shape. This is considered important because the protein has one of the largest shape changes in the known world of proteins.
Ames Laboratory is now the home to a dynamic nuclear polarization (DNP) solid-state nuclear magnetic resonance (NMR) spectrometer that helps scientists understand how individual atoms are arranged in materials. Ames Laboratory’s DNP-NMR is the first to be used for materials science and chemistry in the U.S.
A powerful new tool that could help advance the genetic engineering of “fuel” crops bioenergy, has been developed by researchers with the Joint BioEnergy Institute. Their new, unique assay enabled them to analyze nucleotide sugar transporter activities in Arabidopsis, a promising source of plant biomass, and characterize a family of six nucleotide sugar transporters that has never before been described.
A new method that uses x-rays for the rapid identification of substances present in an indeterminate powder has been developed by a scientist in Denmark. The new technique has the capacity to recognize advanced biological molecules such as proteins, which makes it potentially important in both food production and the pharmaceutical industry, where it opens up new opportunities for the quality assurance of protein-based medicines.
A research team from NIST, working with the Cleveland Clinic, has demonstrated a dramatically improved technique for analyzing biological cells and tissues based on characteristic molecular vibration "signatures." The new NIST technique is an advanced form of the widely used spontaneous Raman spectroscopy, but one that delivers signals that are 10,000 times stronger than obtained from spontaneous Raman scattering.
Janelia Research Campus experts have built a new computational method that can essentially automate much of the time-consuming process of reconstructing an animal's developmental building plan cell by cell. Using image data obtaining using a sophisticated form of light sheet microscopy, the tool can track the movement of cells in an animal’s body in 3-D.
Most current methods of identifying intracellular information result in the death of the individual cells, making it impossible to continue to gain information and assess change over time. Using magnetized carbon nanotubes, scientists in Texas have devised a new method for extracting molecules from live cells without disrupting cell development.
Scientists at Rice Univ. have created a unique sensor that amplifies the optical signature of molecules by about 100 billion times. The new imaging method uses a form of Raman spectroscopy in combination with an intricate but mass reproducible optical amplifier. Newly published tests found the device could accurately identify the composition and structure of individual molecules containing fewer than 20 atoms.
A cheap, portable, microchip-based test for diagnosing type-1 diabetes could speed up diagnosis and enable studies of how the disease develops. Handheld microchips distinguish between the two main forms of diabetes mellitus, which are both characterized by high blood-sugar levels but have different causes. Until now, making the distinction has required a slow, expensive test available only in sophisticated healthcare settings.
Scientists in Switzerland have developed a fast and accurate method for determining exactly which proteins cause allergies to milk. The novel approach, which is based on a specialized form of laser desorption-ionization mass spectrometry, is highly personalized and can extend to other foods as well.
Wyatt Technology Corp. has highlighted a recently authored study that outlines the advantages of quantifying protein-protein interactions (PPI) using automated dynamic light scattering (DLS) in high-throughput screening (HTS) mode to identify promising candidates for drug-like properties. Automated DLS helps establish the suitability of formulations before entering extended stability studies.